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SRX6179422: Trace experiment for center GSC, GENOMIC, species NC10 BACTERIUM 'DUTCH SEDIMENT' WP0AAA
1 CAPILLARY (AB 310 Genetic Analyzer) run: 19,319 spots, 15.3M bases, 420.4Mb downloads

Design: ENV SAMPLE - GEO
Submitted by: GSC
Study: Metagenome derived from a culture enrichment from Twentekanaal sediment
show Abstracthide Abstract
DNA was extracted from a culture enriched from Twentekanaal sediment, designated Twente, and a culture from Ooijpolder ditch sediment, designated Ooij. Only three biological pathways are known to produce molecular oxygen (O2): photosynthesis, microbial chlorite respiration and the detoxification of reactive oxygen species. Here we present evidence for a fourth pathway, possibly of considerable geochemical and evolutionary importance. The pathway was discovered after metagenomic sequencing of an enrichment culture that couples the anaerobic oxidation of methane (CH4) with the reduction of nitrite (NO2-) to dinitrogen gas (N2). The complete genome of the dominant bacterium, named herein Methylomirabilis oxyfera, could be assembled.
Library:
Name: WP0AAA
Instrument: AB 310 Genetic Analyzer
Strategy: WGS
Source: GENOMIC
Selection: unspecified
Layout: SINGLE
Runs: 1 run, 19,319 spots, 15.3M bases, 420.4Mb
Run# of Spots# of BasesSizePublished
SRR941355519,31915.3M420.4Mb2020-12-03

ID:
8233869

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